Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Q9CR55 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q9CR55 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Q9CR55 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Q9CR55 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q9CR55 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Q9CR55 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.64■□□□□ 0.57
Q9CR55 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.64■□□□□ 0.57
Q9CR55 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.64■□□□□ 0.57
Q9CR55 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q9CR55 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Q9CR55 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Q9CR55 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.63■□□□□ 0.57
Q9CR55 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Q9CR55 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q9CR55 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Q9CR55 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.62■□□□□ 0.57
Q9CR55 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Q9CR55 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q9CR55 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.61■□□□□ 0.57
Q9CR55 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Q9CR55 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Q9CR55 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q9CR55 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9CR55 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9CR55 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9CR55 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Q9CR55 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Q9CR55 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9CR55 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Q9CR55 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q9CR55 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Q9CR55 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Cap2-205ENSMUST00000225824 1634 ntBASIC18.59■□□□□ 0.57
Q9CR55 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q9CR55 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9CR55 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9CR55 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9CR55 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9CR55 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.58■□□□□ 0.57
Q9CR55 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q9CR55 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Q9CR55 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms