Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhgc3Q91XX1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhgc3Q91XX1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhgc3Q91XX1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Pcdhgc3Q91XX1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Pcdhgc3Q91XX1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhgc3Q91XX1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc3Q91XX1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc3Q91XX1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc3Q91XX1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc3Q91XX1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc3Q91XX1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc3Q91XX1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc3Q91XX1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc3Q91XX1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdhgc3Q91XX1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.08■□□□□ 0.64
Pcdhgc3Q91XX1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc3Q91XX1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc3Q91XX1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc3Q91XX1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc3Q91XX1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhgc3Q91XX1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc3Q91XX1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms