Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.29■■□□□ 1
Sh3d19Q91X43 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3d19Q91X43 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sh3d19Q91X43 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3d19Q91X43 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.28■■□□□ 1
Sh3d19Q91X43 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Sh3d19Q91X43 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3d19Q91X43 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.27■■□□□ 1
Sh3d19Q91X43 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d19Q91X43 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.27■■□□□ 1
Sh3d19Q91X43 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3d19Q91X43 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d19Q91X43 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d19Q91X43 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d19Q91X43 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.23■□□□□ 0.99
Sh3d19Q91X43 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Gm6139-201ENSMUST00000079261 882 ntBASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d19Q91X43 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d19Q91X43 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh3d19Q91X43 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d19Q91X43 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Serp2-204ENSMUST00000228055 705 ntBASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d19Q91X43 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Mir7075-201ENSMUST00000184187 82 ntBASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3d19Q91X43 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sh3d19Q91X43 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms