Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccdc65Q8VHI7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc65Q8VHI7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc65Q8VHI7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc65Q8VHI7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc65Q8VHI7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc65Q8VHI7 Etf1-202ENSMUST00000180351 108 ntBASIC21.4■■□□□ 1.02
Ccdc65Q8VHI7 Gm7417-201ENSMUST00000192950 473 ntBASIC21.4■■□□□ 1.02
Ccdc65Q8VHI7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc65Q8VHI7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc65Q8VHI7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc65Q8VHI7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc65Q8VHI7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc65Q8VHI7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc65Q8VHI7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.37■■□□□ 1.01
Ccdc65Q8VHI7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 Gm9959-201ENSMUST00000068277 390 ntBASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc65Q8VHI7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc65Q8VHI7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc65Q8VHI7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc65Q8VHI7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc65Q8VHI7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc65Q8VHI7 Rps24-207ENSMUST00000224568 714 ntBASIC21.33■■□□□ 1.01
Ccdc65Q8VHI7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc65Q8VHI7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc65Q8VHI7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccdc65Q8VHI7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccdc65Q8VHI7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc65Q8VHI7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc65Q8VHI7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc65Q8VHI7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms