Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Cuedc1Q8R3V6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cuedc1Q8R3V6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cuedc1Q8R3V6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cuedc1Q8R3V6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
Cuedc1Q8R3V6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cuedc1Q8R3V6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cuedc1Q8R3V6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Gm43017-201ENSMUST00000198296 752 ntBASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Gm5874-201ENSMUST00000096101 508 ntBASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cuedc1Q8R3V6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cuedc1Q8R3V6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cuedc1Q8R3V6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cuedc1Q8R3V6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Gm8493-201ENSMUST00000196881 489 ntBASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cuedc1Q8R3V6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cuedc1Q8R3V6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cuedc1Q8R3V6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.25■□□□□ 0.51
Cuedc1Q8R3V6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cuedc1Q8R3V6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
Cuedc1Q8R3V6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cuedc1Q8R3V6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cuedc1Q8R3V6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cuedc1Q8R3V6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms