Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ebf4Q8K4J2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebf4Q8K4J2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.54■□□□□ 0.56
Ebf4Q8K4J2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebf4Q8K4J2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ebf4Q8K4J2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ebf4Q8K4J2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ebf4Q8K4J2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebf4Q8K4J2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ebf4Q8K4J2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ebf4Q8K4J2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebf4Q8K4J2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.45■□□□□ 0.54
Ebf4Q8K4J2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms