Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mmp28Q8CGV8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp28Q8CGV8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Mmp28Q8CGV8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp28Q8CGV8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp28Q8CGV8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Mmp28Q8CGV8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Mmp28Q8CGV8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp28Q8CGV8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Gm11175-201ENSMUST00000116172 543 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms