Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lin9Q8C735 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lin9Q8C735 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lin9Q8C735 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.18■■□□□ 1.14
Lin9Q8C735 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
Lin9Q8C735 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Lin9Q8C735 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.18■■□□□ 1.14
Lin9Q8C735 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Lin9Q8C735 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.17■■□□□ 1.14
Lin9Q8C735 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
Lin9Q8C735 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.17■■□□□ 1.14
Lin9Q8C735 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.17■■□□□ 1.14
Lin9Q8C735 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lin9Q8C735 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lin9Q8C735 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lin9Q8C735 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.16■■□□□ 1.14
Lin9Q8C735 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lin9Q8C735 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
Lin9Q8C735 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Lin9Q8C735 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.15■■□□□ 1.14
Lin9Q8C735 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lin9Q8C735 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Lin9Q8C735 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.14■■□□□ 1.14
Lin9Q8C735 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lin9Q8C735 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.14■■□□□ 1.13
Lin9Q8C735 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin9Q8C735 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.14■■□□□ 1.13
Lin9Q8C735 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin9Q8C735 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin9Q8C735 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin9Q8C735 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lin9Q8C735 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lin9Q8C735 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lin9Q8C735 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.13■■□□□ 1.13
Lin9Q8C735 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.13■■□□□ 1.13
Lin9Q8C735 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Lin9Q8C735 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lin9Q8C735 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lin9Q8C735 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lin9Q8C735 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lin9Q8C735 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lin9Q8C735 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lin9Q8C735 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Lin9Q8C735 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lin9Q8C735 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lin9Q8C735 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.11■■□□□ 1.13
Lin9Q8C735 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.11■■□□□ 1.13
Lin9Q8C735 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lin9Q8C735 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lin9Q8C735 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lin9Q8C735 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Lin9Q8C735 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lin9Q8C735 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lin9Q8C735 Gm12821-201ENSMUST00000120022 600 ntBASIC22.1■■□□□ 1.13
Lin9Q8C735 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.1■■□□□ 1.13
Lin9Q8C735 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.1■■□□□ 1.13
Lin9Q8C735 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.1■■□□□ 1.13
Lin9Q8C735 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lin9Q8C735 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lin9Q8C735 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lin9Q8C735 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Lin9Q8C735 Golgb1-201ENSMUST00000023534 498 ntBASIC22.09■■□□□ 1.13
Lin9Q8C735 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lin9Q8C735 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lin9Q8C735 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin9Q8C735 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Lin9Q8C735 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lin9Q8C735 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
Lin9Q8C735 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lin9Q8C735 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lin9Q8C735 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.08■■□□□ 1.13
Lin9Q8C735 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lin9Q8C735 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lin9Q8C735 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lin9Q8C735 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lin9Q8C735 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lin9Q8C735 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lin9Q8C735 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lin9Q8C735 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lin9Q8C735 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms