Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpa1Q8BLA8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trpa1Q8BLA8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trpa1Q8BLA8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Trpa1Q8BLA8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Trpa1Q8BLA8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trpa1Q8BLA8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trpa1Q8BLA8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpa1Q8BLA8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.24■□□□□ 0.99
Trpa1Q8BLA8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpa1Q8BLA8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpa1Q8BLA8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpa1Q8BLA8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpa1Q8BLA8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpa1Q8BLA8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Trpa1Q8BLA8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.2■□□□□ 0.98
Trpa1Q8BLA8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trpa1Q8BLA8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trpa1Q8BLA8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trpa1Q8BLA8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms