Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trnp1Q80ZI1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trnp1Q80ZI1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Trnp1Q80ZI1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.33■■□□□ 1.33
Trnp1Q80ZI1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trnp1Q80ZI1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trnp1Q80ZI1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Trnp1Q80ZI1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Trnp1Q80ZI1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trnp1Q80ZI1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trnp1Q80ZI1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.3■■□□□ 1.32
Trnp1Q80ZI1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trnp1Q80ZI1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.29■■□□□ 1.32
Trnp1Q80ZI1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trnp1Q80ZI1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trnp1Q80ZI1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trnp1Q80ZI1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trnp1Q80ZI1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trnp1Q80ZI1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trnp1Q80ZI1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trnp1Q80ZI1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms