Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Usp6nlQ80XC3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.58■■□□□ 1.2
Usp6nlQ80XC3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Usp6nlQ80XC3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp6nlQ80XC3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Gm27405-201ENSMUST00000184201 112 ntBASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp6nlQ80XC3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp6nlQ80XC3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 Gm42642-201ENSMUST00000200683 355 ntBASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp6nlQ80XC3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp6nlQ80XC3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp6nlQ80XC3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.53■■□□□ 1.2
Usp6nlQ80XC3 Gm42569-201ENSMUST00000200539 472 ntBASIC22.53■■□□□ 1.2
Usp6nlQ80XC3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.53■■□□□ 1.2
Usp6nlQ80XC3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp6nlQ80XC3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.52■■□□□ 1.2
Usp6nlQ80XC3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.52■■□□□ 1.19
Usp6nlQ80XC3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp6nlQ80XC3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp6nlQ80XC3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp6nlQ80XC3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp6nlQ80XC3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp6nlQ80XC3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms