Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsm8Q6ZWM4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm8Q6ZWM4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm8Q6ZWM4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm8Q6ZWM4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm8Q6ZWM4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm8Q6ZWM4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Lsm8Q6ZWM4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Lsm8Q6ZWM4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lsm8Q6ZWM4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm8Q6ZWM4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lsm8Q6ZWM4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.34■■□□□ 1.01
Lsm8Q6ZWM4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.34■■□□□ 1.01
Lsm8Q6ZWM4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Lsm8Q6ZWM4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lsm8Q6ZWM4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Lsm8Q6ZWM4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lsm8Q6ZWM4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lsm8Q6ZWM4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lsm8Q6ZWM4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lsm8Q6ZWM4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms