Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Kdm3aQ6PCM1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Kdm3aQ6PCM1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Kdm3aQ6PCM1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Kdm3aQ6PCM1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
Kdm3aQ6PCM1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Kdm3aQ6PCM1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Kdm3aQ6PCM1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Kdm3aQ6PCM1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Kdm3aQ6PCM1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Kdm3aQ6PCM1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Kdm3aQ6PCM1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Kdm3aQ6PCM1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Kdm3aQ6PCM1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Kdm3aQ6PCM1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Kdm3aQ6PCM1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Kdm3aQ6PCM1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm3aQ6PCM1 Mir7075-201ENSMUST00000184187 82 ntBASIC24.62■■□□□ 1.53
Kdm3aQ6PCM1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm3aQ6PCM1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm3aQ6PCM1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Gm6139-201ENSMUST00000079261 882 ntBASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Kdm3aQ6PCM1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Mir6236-201ENSMUST00000184437 123 ntBASIC24.6■■□□□ 1.53
Kdm3aQ6PCM1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm3aQ6PCM1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Kdm3aQ6PCM1 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.58■■□□□ 1.53
Kdm3aQ6PCM1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Kdm3aQ6PCM1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Kdm3aQ6PCM1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
Kdm3aQ6PCM1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Kdm3aQ6PCM1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Kdm3aQ6PCM1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Kdm3aQ6PCM1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Kdm3aQ6PCM1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Kdm3aQ6PCM1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.57■■□□□ 1.52
Kdm3aQ6PCM1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Spcs1-204ENSMUST00000226782 949 ntBASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm3aQ6PCM1 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Gm12251-201ENSMUST00000117893 792 ntBASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Gm8493-201ENSMUST00000196881 489 ntBASIC24.55■■□□□ 1.52
Kdm3aQ6PCM1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Serp2-204ENSMUST00000228055 705 ntBASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Kdm3aQ6PCM1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kdm3aQ6PCM1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms