Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.37■■□□□ 1.01
Shkbp1Q6P7W2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Shkbp1Q6P7W2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shkbp1Q6P7W2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shkbp1Q6P7W2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Shkbp1Q6P7W2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shkbp1Q6P7W2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shkbp1Q6P7W2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.34■■□□□ 1.01
Shkbp1Q6P7W2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shkbp1Q6P7W2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Gm43060-201ENSMUST00000200621 289 ntBASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Shkbp1Q6P7W2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Gm40848-201ENSMUST00000221998 324 ntBASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Shkbp1Q6P7W2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shkbp1Q6P7W2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.3■■□□□ 1
Shkbp1Q6P7W2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.3■■□□□ 1
Shkbp1Q6P7W2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shkbp1Q6P7W2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Smad6-203ENSMUST00000179458 273 ntBASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.29■■□□□ 1
Shkbp1Q6P7W2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shkbp1Q6P7W2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shkbp1Q6P7W2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shkbp1Q6P7W2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shkbp1Q6P7W2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shkbp1Q6P7W2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shkbp1Q6P7W2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shkbp1Q6P7W2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Shkbp1Q6P7W2 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.24■□□□□ 0.99
Shkbp1Q6P7W2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 230.9 ms