Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Rtl3Q6P1Y1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl3Q6P1Y1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Serp2-204ENSMUST00000228055 705 ntBASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl3Q6P1Y1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Gm27454-201ENSMUST00000185090 204 ntBASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl3Q6P1Y1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl3Q6P1Y1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl3Q6P1Y1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl3Q6P1Y1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl3Q6P1Y1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rtl3Q6P1Y1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl3Q6P1Y1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rtl3Q6P1Y1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.95■□□□□ 0.94
Rtl3Q6P1Y1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Rtl3Q6P1Y1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl3Q6P1Y1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl3Q6P1Y1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl3Q6P1Y1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Gm45417-201ENSMUST00000209533 758 ntBASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl3Q6P1Y1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.89■□□□□ 0.94
Rtl3Q6P1Y1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.89■□□□□ 0.94
Rtl3Q6P1Y1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms