Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.26■□□□□ 0.99
Smarcd1Q61466 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd1Q61466 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smarcd1Q61466 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd1Q61466 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd1Q61466 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd1Q61466 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.23■□□□□ 0.99
Smarcd1Q61466 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd1Q61466 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcd1Q61466 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.22■□□□□ 0.99
Smarcd1Q61466 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.22■□□□□ 0.99
Smarcd1Q61466 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Smarcd1Q61466 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Gm45417-201ENSMUST00000209533 758 ntBASIC21.21■□□□□ 0.99
Smarcd1Q61466 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Smarcd1Q61466 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Smarcd1Q61466 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Gm43137-201ENSMUST00000198052 594 ntBASIC21.2■□□□□ 0.98
Smarcd1Q61466 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd1Q61466 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd1Q61466 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd1Q61466 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcd1Q61466 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd1Q61466 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.18■□□□□ 0.98
Smarcd1Q61466 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Smarcd1Q61466 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd1Q61466 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.18■□□□□ 0.98
Smarcd1Q61466 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcd1Q61466 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Gm15039-201ENSMUST00000118914 875 ntBASIC21.17■□□□□ 0.98
Smarcd1Q61466 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcd1Q61466 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.16■□□□□ 0.98
Smarcd1Q61466 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Smarcd1Q61466 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms