Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clns1aQ61189 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clns1aQ61189 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clns1aQ61189 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clns1aQ61189 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clns1aQ61189 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clns1aQ61189 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Clns1aQ61189 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clns1aQ61189 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.33■□□□□ 0.36
Clns1aQ61189 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clns1aQ61189 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clns1aQ61189 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clns1aQ61189 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.33■□□□□ 0.36
Clns1aQ61189 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clns1aQ61189 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.33■□□□□ 0.36
Clns1aQ61189 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clns1aQ61189 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clns1aQ61189 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.32■□□□□ 0.36
Clns1aQ61189 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clns1aQ61189 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clns1aQ61189 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clns1aQ61189 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.31■□□□□ 0.36
Clns1aQ61189 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clns1aQ61189 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.3■□□□□ 0.36
Clns1aQ61189 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clns1aQ61189 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clns1aQ61189 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.29■□□□□ 0.36
Clns1aQ61189 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.29■□□□□ 0.36
Clns1aQ61189 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.29■□□□□ 0.36
Clns1aQ61189 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.29■□□□□ 0.36
Clns1aQ61189 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clns1aQ61189 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.28■□□□□ 0.36
Clns1aQ61189 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Clns1aQ61189 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clns1aQ61189 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Clns1aQ61189 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clns1aQ61189 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Gm6311-201ENSMUST00000073790 878 ntBASIC17.28■□□□□ 0.36
Clns1aQ61189 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Clns1aQ61189 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clns1aQ61189 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Clns1aQ61189 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clns1aQ61189 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Clns1aQ61189 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.27■□□□□ 0.36
Clns1aQ61189 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.27■□□□□ 0.36
Clns1aQ61189 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.27■□□□□ 0.36
Clns1aQ61189 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms