Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clhc1Q5M6W3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clhc1Q5M6W3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clhc1Q5M6W3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clhc1Q5M6W3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clhc1Q5M6W3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clhc1Q5M6W3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clhc1Q5M6W3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Clhc1Q5M6W3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clhc1Q5M6W3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clhc1Q5M6W3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clhc1Q5M6W3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clhc1Q5M6W3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms