Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hdm4Q4VBF2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22■■□□□ 1.11
R3hdm4Q4VBF2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22■■□□□ 1.11
R3hdm4Q4VBF2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22■■□□□ 1.11
R3hdm4Q4VBF2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
R3hdm4Q4VBF2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hdm4Q4VBF2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hdm4Q4VBF2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
R3hdm4Q4VBF2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hdm4Q4VBF2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
R3hdm4Q4VBF2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3hdm4Q4VBF2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3hdm4Q4VBF2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Gm13241-201ENSMUST00000094493 780 ntBASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3hdm4Q4VBF2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3hdm4Q4VBF2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3hdm4Q4VBF2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3hdm4Q4VBF2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3hdm4Q4VBF2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
R3hdm4Q4VBF2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms