Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BC051142Q3V0M8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BC051142Q3V0M8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BC051142Q3V0M8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BC051142Q3V0M8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Gm15546-201ENSMUST00000122095 826 ntBASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BC051142Q3V0M8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.72■■□□□ 1.07
BC051142Q3V0M8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BC051142Q3V0M8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
BC051142Q3V0M8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BC051142Q3V0M8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.71■■□□□ 1.07
BC051142Q3V0M8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.71■■□□□ 1.07
BC051142Q3V0M8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BC051142Q3V0M8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BC051142Q3V0M8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.7■■□□□ 1.07
BC051142Q3V0M8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BC051142Q3V0M8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BC051142Q3V0M8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BC051142Q3V0M8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BC051142Q3V0M8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BC051142Q3V0M8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BC051142Q3V0M8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BC051142Q3V0M8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BC051142Q3V0M8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.64■■□□□ 1.05
BC051142Q3V0M8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BC051142Q3V0M8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
BC051142Q3V0M8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BC051142Q3V0M8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
BC051142Q3V0M8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
BC051142Q3V0M8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms