Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Uspl1Q3ULM6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Uspl1Q3ULM6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Uspl1Q3ULM6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Uspl1Q3ULM6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uspl1Q3ULM6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Uspl1Q3ULM6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC26.5■■□□□ 1.83
Uspl1Q3ULM6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.5■■□□□ 1.83
Uspl1Q3ULM6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Uspl1Q3ULM6 Gm9847-201ENSMUST00000052528 599 ntBASIC26.5■■□□□ 1.83
Uspl1Q3ULM6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Uspl1Q3ULM6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 Gm21956-201ENSMUST00000179946 522 ntBASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Uspl1Q3ULM6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Uspl1Q3ULM6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Uspl1Q3ULM6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Uspl1Q3ULM6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Uspl1Q3ULM6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Uspl1Q3ULM6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Uspl1Q3ULM6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Uspl1Q3ULM6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Uspl1Q3ULM6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Uspl1Q3ULM6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Uspl1Q3ULM6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Uspl1Q3ULM6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Uspl1Q3ULM6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Uspl1Q3ULM6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Uspl1Q3ULM6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Uspl1Q3ULM6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.44■■□□□ 1.82
Uspl1Q3ULM6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Uspl1Q3ULM6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Uspl1Q3ULM6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Uspl1Q3ULM6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Uspl1Q3ULM6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Uspl1Q3ULM6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Uspl1Q3ULM6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Uspl1Q3ULM6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.4■■□□□ 1.82
Uspl1Q3ULM6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
Uspl1Q3ULM6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Uspl1Q3ULM6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Uspl1Q3ULM6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.39■■□□□ 1.82
Uspl1Q3ULM6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Uspl1Q3ULM6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Uspl1Q3ULM6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Uspl1Q3ULM6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Uspl1Q3ULM6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Uspl1Q3ULM6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Uspl1Q3ULM6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 Gm37035-201ENSMUST00000194809 2148 ntBASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Uspl1Q3ULM6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Uspl1Q3ULM6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms