Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Gm27454-201ENSMUST00000185090 204 ntBASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-3Q3UHX8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-3Q3UHX8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-3Q3UHX8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx6-3Q3UHX8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx6-3Q3UHX8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-3Q3UHX8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-3Q3UHX8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-3Q3UHX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-3Q3UHX8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-3Q3UHX8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-3Q3UHX8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-3Q3UHX8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-3Q3UHX8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Gm43137-201ENSMUST00000198052 594 ntBASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Gm45417-201ENSMUST00000209533 758 ntBASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-3Q3UHX8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-3Q3UHX8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms