Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cacna1aP97445 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.84■□□□□ 0.61
Cacna1aP97445 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1aP97445 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1aP97445 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1aP97445 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1aP97445 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.83■□□□□ 0.61
Cacna1aP97445 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1aP97445 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1aP97445 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1aP97445 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.83■□□□□ 0.6
Cacna1aP97445 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1aP97445 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1aP97445 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1aP97445 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.82■□□□□ 0.6
Cacna1aP97445 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1aP97445 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1aP97445 Gm10252-201ENSMUST00000209541 832 ntBASIC18.82■□□□□ 0.6
Cacna1aP97445 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1aP97445 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.81■□□□□ 0.6
Cacna1aP97445 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1aP97445 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1aP97445 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1aP97445 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.8■□□□□ 0.6
Cacna1aP97445 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1aP97445 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1aP97445 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.79■□□□□ 0.6
Cacna1aP97445 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Gm7977-201ENSMUST00000193787 748 ntBASIC18.79■□□□□ 0.6
Cacna1aP97445 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1aP97445 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1aP97445 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1aP97445 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1aP97445 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1aP97445 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacna1aP97445 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cacna1aP97445 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Gm10602-201ENSMUST00000098239 609 ntBASIC18.78■□□□□ 0.6
Cacna1aP97445 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1aP97445 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.77■□□□□ 0.6
Cacna1aP97445 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1aP97445 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1aP97445 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1aP97445 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1aP97445 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1aP97445 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1aP97445 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.77■□□□□ 0.59
Cacna1aP97445 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.76■□□□□ 0.59
Cacna1aP97445 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Gm12933-201ENSMUST00000120203 872 ntBASIC18.76■□□□□ 0.59
Cacna1aP97445 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1aP97445 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1aP97445 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1aP97445 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1aP97445 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1aP97445 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1aP97445 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cacna1aP97445 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.75■□□□□ 0.59
Cacna1aP97445 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cacna1aP97445 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1aP97445 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms