Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19■□□□□ 0.63
Six5P70178 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19■□□□□ 0.63
Six5P70178 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19■□□□□ 0.63
Six5P70178 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Six5P70178 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19■□□□□ 0.63
Six5P70178 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six5P70178 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six5P70178 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six5P70178 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.99■□□□□ 0.63
Six5P70178 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.99■□□□□ 0.63
Six5P70178 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Six5P70178 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six5P70178 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six5P70178 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Six5P70178 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Six5P70178 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six5P70178 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Six5P70178 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
Six5P70178 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.97■□□□□ 0.63
Six5P70178 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Six5P70178 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.97■□□□□ 0.63
Six5P70178 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.97■□□□□ 0.63
Six5P70178 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Six5P70178 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six5P70178 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Six5P70178 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.96■□□□□ 0.63
Six5P70178 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.96■□□□□ 0.63
Six5P70178 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six5P70178 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Six5P70178 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six5P70178 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Six5P70178 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six5P70178 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Six5P70178 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six5P70178 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six5P70178 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Six5P70178 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six5P70178 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.94■□□□□ 0.62
Six5P70178 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Six5P70178 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six5P70178 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Six5P70178 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Six5P70178 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six5P70178 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Six5P70178 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Six5P70178 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.92■□□□□ 0.62
Six5P70178 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
Six5P70178 Gm43530-201ENSMUST00000195920 274 ntBASIC18.92■□□□□ 0.62
Six5P70178 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six5P70178 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six5P70178 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six5P70178 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.91■□□□□ 0.62
Six5P70178 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six5P70178 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms