Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl27P61358 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl27P61358 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Rpl27P61358 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rpl27P61358 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.16■□□□□ 0.5
Rpl27P61358 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rpl27P61358 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl27P61358 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpl27P61358 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpl27P61358 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpl27P61358 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl27P61358 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl27P61358 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl27P61358 Gm15820-201ENSMUST00000201566 728 ntBASIC18.14■□□□□ 0.49
Rpl27P61358 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl27P61358 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpl27P61358 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.13■□□□□ 0.49
Rpl27P61358 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rpl27P61358 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rpl27P61358 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rpl27P61358 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl27P61358 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rpl27P61358 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpl27P61358 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.12■□□□□ 0.49
Rpl27P61358 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.12■□□□□ 0.49
Rpl27P61358 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.12■□□□□ 0.49
Rpl27P61358 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.12■□□□□ 0.49
Rpl27P61358 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Gm5812-201ENSMUST00000061073 957 ntBASIC18.12■□□□□ 0.49
Rpl27P61358 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl27P61358 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rpl27P61358 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.11■□□□□ 0.49
Rpl27P61358 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl27P61358 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl27P61358 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl27P61358 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.1■□□□□ 0.49
Rpl27P61358 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl27P61358 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rpl27P61358 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.1■□□□□ 0.49
Rpl27P61358 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl27P61358 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rpl27P61358 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl27P61358 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.09■□□□□ 0.49
Rpl27P61358 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.09■□□□□ 0.49
Rpl27P61358 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Gm7143-201ENSMUST00000222811 859 ntBASIC18.09■□□□□ 0.49
Rpl27P61358 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.09■□□□□ 0.49
Rpl27P61358 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl27P61358 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rpl27P61358 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpl27P61358 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl27P61358 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.08■□□□□ 0.48
Rpl27P61358 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.08■□□□□ 0.48
Rpl27P61358 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl27P61358 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpl27P61358 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl27P61358 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rpl27P61358 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl27P61358 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rpl27P61358 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl27P61358 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl27P61358 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms