Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmx3P42581 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmx3P42581 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmx3P42581 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmx3P42581 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hmx3P42581 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmx3P42581 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmx3P42581 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmx3P42581 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.76■□□□□ 0.27
Hmx3P42581 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hmx3P42581 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hmx3P42581 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmx3P42581 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmx3P42581 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmx3P42581 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmx3P42581 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.75■□□□□ 0.27
Hmx3P42581 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.75■□□□□ 0.27
Hmx3P42581 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmx3P42581 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmx3P42581 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmx3P42581 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hmx3P42581 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmx3P42581 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmx3P42581 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmx3P42581 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmx3P42581 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmx3P42581 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Hmx3P42581 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmx3P42581 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Hmx3P42581 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hmx3P42581 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmx3P42581 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmx3P42581 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmx3P42581 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmx3P42581 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmx3P42581 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmx3P42581 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmx3P42581 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Hmx3P42581 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.71■□□□□ 0.27
Hmx3P42581 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmx3P42581 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmx3P42581 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmx3P42581 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmx3P42581 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmx3P42581 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Hmx3P42581 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.69■□□□□ 0.26
Hmx3P42581 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.69■□□□□ 0.26
Hmx3P42581 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmx3P42581 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Hmx3P42581 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms