Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.34■□□□□ 0.21
Cd27P41272 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.34■□□□□ 0.21
Cd27P41272 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cd27P41272 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Cd27P41272 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cd27P41272 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd27P41272 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd27P41272 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd27P41272 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
Cd27P41272 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.33■□□□□ 0.2
Cd27P41272 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cd27P41272 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd27P41272 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.32■□□□□ 0.2
Cd27P41272 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd27P41272 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd27P41272 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd27P41272 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.32■□□□□ 0.2
Cd27P41272 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.32■□□□□ 0.2
Cd27P41272 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd27P41272 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd27P41272 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd27P41272 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd27P41272 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd27P41272 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd27P41272 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cd27P41272 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd27P41272 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd27P41272 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd27P41272 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd27P41272 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.3■□□□□ 0.2
Cd27P41272 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd27P41272 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.3■□□□□ 0.2
Cd27P41272 Golgb1-201ENSMUST00000023534 498 ntBASIC16.3■□□□□ 0.2
Cd27P41272 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cd27P41272 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd27P41272 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Cd27P41272 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Gm12922-201ENSMUST00000120626 809 ntBASIC16.29■□□□□ 0.2
Cd27P41272 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.29■□□□□ 0.2
Cd27P41272 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd27P41272 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd27P41272 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd27P41272 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.28■□□□□ 0.2
Cd27P41272 Gm43530-201ENSMUST00000195920 274 ntBASIC16.28■□□□□ 0.2
Cd27P41272 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd27P41272 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd27P41272 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd27P41272 Gm21956-201ENSMUST00000179946 522 ntBASIC16.27■□□□□ 0.2
Cd27P41272 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Cd27P41272 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd27P41272 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd27P41272 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd27P41272 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd27P41272 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd27P41272 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd27P41272 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Cd27P41272 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd27P41272 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd27P41272 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd27P41272 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Cd27P41272 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd27P41272 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms