Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh16O88338 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh16O88338 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh16O88338 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh16O88338 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh16O88338 Gm27502-201ENSMUST00000183495 199 ntBASIC19.83■□□□□ 0.77
Cdh16O88338 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.83■□□□□ 0.77
Cdh16O88338 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh16O88338 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh16O88338 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh16O88338 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cdh16O88338 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Cdh16O88338 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh16O88338 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cdh16O88338 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh16O88338 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.82■□□□□ 0.76
Cdh16O88338 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh16O88338 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh16O88338 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh16O88338 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cdh16O88338 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cdh16O88338 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh16O88338 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cdh16O88338 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdh16O88338 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cdh16O88338 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh16O88338 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh16O88338 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh16O88338 Gm14523-201ENSMUST00000117260 558 ntBASIC19.78■□□□□ 0.76
Cdh16O88338 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh16O88338 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh16O88338 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh16O88338 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh16O88338 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh16O88338 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh16O88338 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh16O88338 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh16O88338 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh16O88338 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh16O88338 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh16O88338 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.76■□□□□ 0.75
Cdh16O88338 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.76■□□□□ 0.75
Cdh16O88338 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.76■□□□□ 0.75
Cdh16O88338 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh16O88338 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh16O88338 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdh16O88338 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh16O88338 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh16O88338 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cdh16O88338 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdh16O88338 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.73■□□□□ 0.75
Cdh16O88338 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh16O88338 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdh16O88338 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh16O88338 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.73■□□□□ 0.75
Cdh16O88338 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh16O88338 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms