Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd46O88174 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd46O88174 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd46O88174 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd46O88174 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd46O88174 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cd46O88174 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.38■□□□□ 0.53
Cd46O88174 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cd46O88174 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Cd46O88174 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd46O88174 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd46O88174 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd46O88174 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.37■□□□□ 0.53
Cd46O88174 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.37■□□□□ 0.53
Cd46O88174 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd46O88174 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd46O88174 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd46O88174 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.36■□□□□ 0.53
Cd46O88174 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Gm42569-201ENSMUST00000200539 472 ntBASIC18.36■□□□□ 0.53
Cd46O88174 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd46O88174 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cd46O88174 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cd46O88174 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.35■□□□□ 0.53
Cd46O88174 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.35■□□□□ 0.53
Cd46O88174 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.35■□□□□ 0.53
Cd46O88174 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.35■□□□□ 0.53
Cd46O88174 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd46O88174 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cd46O88174 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.34■□□□□ 0.53
Cd46O88174 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cd46O88174 Gm42642-201ENSMUST00000200683 355 ntBASIC18.34■□□□□ 0.53
Cd46O88174 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd46O88174 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd46O88174 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd46O88174 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd46O88174 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cd46O88174 Gm40848-201ENSMUST00000221998 324 ntBASIC18.33■□□□□ 0.52
Cd46O88174 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.33■□□□□ 0.52
Cd46O88174 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd46O88174 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cd46O88174 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd46O88174 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd46O88174 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.33■□□□□ 0.52
Cd46O88174 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.32■□□□□ 0.52
Cd46O88174 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cd46O88174 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Smad6-203ENSMUST00000179458 273 ntBASIC18.32■□□□□ 0.52
Cd46O88174 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cd46O88174 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd46O88174 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
Cd46O88174 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.31■□□□□ 0.52
Cd46O88174 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.31■□□□□ 0.52
Cd46O88174 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.31■□□□□ 0.52
Cd46O88174 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.31■□□□□ 0.52
Cd46O88174 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.31■□□□□ 0.52
Cd46O88174 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd46O88174 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.3■□□□□ 0.52
Cd46O88174 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd46O88174 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms