Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ChkaO54804 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.56■□□□□ 0.88
ChkaO54804 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.56■□□□□ 0.88
ChkaO54804 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.56■□□□□ 0.88
ChkaO54804 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChkaO54804 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ChkaO54804 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChkaO54804 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.55■□□□□ 0.88
ChkaO54804 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ChkaO54804 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChkaO54804 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChkaO54804 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ChkaO54804 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChkaO54804 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ChkaO54804 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChkaO54804 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
ChkaO54804 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChkaO54804 Gm10399-202ENSMUST00000202768 748 ntBASIC20.54■□□□□ 0.88
ChkaO54804 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ChkaO54804 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChkaO54804 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChkaO54804 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChkaO54804 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChkaO54804 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.53■□□□□ 0.88
ChkaO54804 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ChkaO54804 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.53■□□□□ 0.88
ChkaO54804 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ChkaO54804 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ChkaO54804 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChkaO54804 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChkaO54804 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ChkaO54804 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ChkaO54804 Gm10232-201ENSMUST00000089221 720 ntBASIC20.52■□□□□ 0.88
ChkaO54804 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
ChkaO54804 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ChkaO54804 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ChkaO54804 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ChkaO54804 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.51■□□□□ 0.87
ChkaO54804 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.51■□□□□ 0.87
ChkaO54804 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.51■□□□□ 0.87
ChkaO54804 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChkaO54804 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ChkaO54804 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ChkaO54804 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ChkaO54804 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ChkaO54804 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ChkaO54804 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ChkaO54804 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ChkaO54804 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ChkaO54804 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ChkaO54804 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ChkaO54804 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ChkaO54804 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.49■□□□□ 0.87
ChkaO54804 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.49■□□□□ 0.87
ChkaO54804 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ChkaO54804 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ChkaO54804 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ChkaO54804 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ChkaO54804 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
ChkaO54804 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ChkaO54804 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.48■□□□□ 0.87
ChkaO54804 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ChkaO54804 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ChkaO54804 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ChkaO54804 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.47■□□□□ 0.87
ChkaO54804 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ChkaO54804 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ChkaO54804 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.46■□□□□ 0.87
ChkaO54804 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.46■□□□□ 0.87
ChkaO54804 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.46■□□□□ 0.87
ChkaO54804 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ChkaO54804 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ChkaO54804 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms