Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Colca2F8VPY8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Colca2F8VPY8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Colca2F8VPY8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Colca2F8VPY8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Colca2F8VPY8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.66■□□□□ 0.74
Colca2F8VPY8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Colca2F8VPY8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Colca2F8VPY8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.66■□□□□ 0.74
Colca2F8VPY8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
Colca2F8VPY8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Colca2F8VPY8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.65■□□□□ 0.74
Colca2F8VPY8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Colca2F8VPY8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Colca2F8VPY8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.64■□□□□ 0.73
Colca2F8VPY8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.64■□□□□ 0.73
Colca2F8VPY8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Colca2F8VPY8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Colca2F8VPY8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Colca2F8VPY8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Colca2F8VPY8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Colca2F8VPY8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Colca2F8VPY8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Colca2F8VPY8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Colca2F8VPY8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.62■□□□□ 0.73
Colca2F8VPY8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.62■□□□□ 0.73
Colca2F8VPY8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Colca2F8VPY8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.62■□□□□ 0.73
Colca2F8VPY8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Colca2F8VPY8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.61■□□□□ 0.73
Colca2F8VPY8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Colca2F8VPY8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Colca2F8VPY8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Colca2F8VPY8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Colca2F8VPY8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Colca2F8VPY8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.58■□□□□ 0.72
Colca2F8VPY8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Colca2F8VPY8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.57■□□□□ 0.72
Colca2F8VPY8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Colca2F8VPY8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Colca2F8VPY8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Colca2F8VPY8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Colca2F8VPY8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Colca2F8VPY8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Colca2F8VPY8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms