Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col9a3A2ACT7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Gm37179-201ENSMUST00000194862 823 ntBASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col9a3A2ACT7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col9a3A2ACT7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Col9a3A2ACT7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col9a3A2ACT7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.02■□□□□ 0.8
Col9a3A2ACT7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col9a3A2ACT7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col9a3A2ACT7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col9a3A2ACT7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col9a3A2ACT7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20■□□□□ 0.79
Col9a3A2ACT7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col9a3A2ACT7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20■□□□□ 0.79
Col9a3A2ACT7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col9a3A2ACT7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col9a3A2ACT7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col9a3A2ACT7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col9a3A2ACT7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.99■□□□□ 0.79
Col9a3A2ACT7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col9a3A2ACT7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col9a3A2ACT7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col9a3A2ACT7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms