Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-2A0A0G2JF93 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm45364-201ENSMUST00000210883 159 ntBASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-2A0A0G2JF93 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13n-2A0A0G2JF93 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13n-2A0A0G2JF93 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav13n-2A0A0G2JF93 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms