Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7n-4A0A075B620 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Gm44428-201ENSMUST00000204474 874 ntBASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav7n-4A0A075B620 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav7n-4A0A075B620 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav7n-4A0A075B620 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7n-4A0A075B620 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7n-4A0A075B620 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7n-4A0A075B620 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7n-4A0A075B620 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7n-4A0A075B620 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Gm6821-201ENSMUST00000107540 542 ntBASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7n-4A0A075B620 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7n-4A0A075B620 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav7n-4A0A075B620 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms