Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6-1A0A075B5Z8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-1A0A075B5Z8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-1A0A075B5Z8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav6-1A0A075B5Z8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6-1A0A075B5Z8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-1A0A075B5Z8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-1A0A075B5Z8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-1A0A075B5Z8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-1A0A075B5Z8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-1A0A075B5Z8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-1A0A075B5Z8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Gm10420-201ENSMUST00000121713 882 ntBASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-1A0A075B5Z8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-1A0A075B5Z8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-1A0A075B5Z8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms