Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Col4a4Q9QZR9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a4Q9QZR9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a4Q9QZR9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a4Q9QZR9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a4Q9QZR9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a4Q9QZR9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col4a4Q9QZR9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a4Q9QZR9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a4Q9QZR9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.13■□□□□ 0.97
Col4a4Q9QZR9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col4a4Q9QZR9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a4Q9QZR9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Gm12441-201ENSMUST00000121806 588 ntBASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.12■□□□□ 0.97
Col4a4Q9QZR9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a4Q9QZR9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.11■□□□□ 0.97
Col4a4Q9QZR9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.11■□□□□ 0.97
Col4a4Q9QZR9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a4Q9QZR9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a4Q9QZR9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a4Q9QZR9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a4Q9QZR9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a4Q9QZR9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a4Q9QZR9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a4Q9QZR9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a4Q9QZR9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a4Q9QZR9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Col4a4Q9QZR9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col4a4Q9QZR9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.08■□□□□ 0.97
Col4a4Q9QZR9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a4Q9QZR9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a4Q9QZR9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a4Q9QZR9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a4Q9QZR9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a4Q9QZR9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
Col4a4Q9QZR9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.05■□□□□ 0.96
Col4a4Q9QZR9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a4Q9QZR9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.05■□□□□ 0.96
Col4a4Q9QZR9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Col4a4Q9QZR9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col4a4Q9QZR9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Col4a4Q9QZR9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a4Q9QZR9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Mir7071-201ENSMUST00000184847 69 ntBASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Col4a4Q9QZR9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Gm13234-201ENSMUST00000120010 747 ntBASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a4Q9QZR9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a4Q9QZR9 Gm9988-201ENSMUST00000069786 435 ntBASIC21.02■□□□□ 0.95
Col4a4Q9QZR9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a4Q9QZR9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col4a4Q9QZR9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms