Protein–RNA interactions for Protein: Q9DAW6

Prpf4, U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4Q9DAW6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf4Q9DAW6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf4Q9DAW6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Prpf4Q9DAW6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.32■■□□□ 1
Prpf4Q9DAW6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf4Q9DAW6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.31■■□□□ 1
Prpf4Q9DAW6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf4Q9DAW6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf4Q9DAW6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf4Q9DAW6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf4Q9DAW6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf4Q9DAW6 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.28■■□□□ 1
Prpf4Q9DAW6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prpf4Q9DAW6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf4Q9DAW6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Prpf4Q9DAW6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prpf4Q9DAW6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.27■■□□□ 1
Prpf4Q9DAW6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf4Q9DAW6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Prpf4Q9DAW6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf4Q9DAW6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf4Q9DAW6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Gm14523-201ENSMUST00000117260 558 ntBASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf4Q9DAW6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Prpf4Q9DAW6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf4Q9DAW6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Prpf4Q9DAW6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf4Q9DAW6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms