Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a3Q9D554 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a3Q9D554 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a3Q9D554 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a3Q9D554 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a3Q9D554 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a3Q9D554 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a3Q9D554 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a3Q9D554 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a3Q9D554 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a3Q9D554 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a3Q9D554 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a3Q9D554 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a3Q9D554 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.59■□□□□ 0.89
Sf3a3Q9D554 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a3Q9D554 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3a3Q9D554 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.58■□□□□ 0.88
Sf3a3Q9D554 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3a3Q9D554 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sf3a3Q9D554 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.57■□□□□ 0.88
Sf3a3Q9D554 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
Sf3a3Q9D554 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a3Q9D554 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms