Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gtf2ird2Q99NI3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gtf2ird2Q99NI3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Gm21956-201ENSMUST00000179946 522 ntBASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf2ird2Q99NI3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf2ird2Q99NI3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf2ird2Q99NI3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.97■□□□□ 0.95
Gtf2ird2Q99NI3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf2ird2Q99NI3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf2ird2Q99NI3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf2ird2Q99NI3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf2ird2Q99NI3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gtf2ird2Q99NI3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gtf2ird2Q99NI3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gtf2ird2Q99NI3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.9■□□□□ 0.94
Gtf2ird2Q99NI3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Gtf2ird2Q99NI3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf2ird2Q99NI3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf2ird2Q99NI3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.89■□□□□ 0.93
Gtf2ird2Q99NI3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gtf2ird2Q99NI3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gtf2ird2Q99NI3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms