Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.88■□□□□ 0.45
Scrt1Q99M85 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scrt1Q99M85 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Gm8493-201ENSMUST00000196881 489 ntBASIC17.88■□□□□ 0.45
Scrt1Q99M85 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scrt1Q99M85 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scrt1Q99M85 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.86■□□□□ 0.45
Scrt1Q99M85 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scrt1Q99M85 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.85■□□□□ 0.45
Scrt1Q99M85 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.85■□□□□ 0.45
Scrt1Q99M85 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scrt1Q99M85 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.84■□□□□ 0.45
Scrt1Q99M85 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scrt1Q99M85 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scrt1Q99M85 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scrt1Q99M85 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.83■□□□□ 0.45
Scrt1Q99M85 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
Scrt1Q99M85 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.83■□□□□ 0.44
Scrt1Q99M85 Gm7291-201ENSMUST00000199147 382 ntBASIC17.83■□□□□ 0.44
Scrt1Q99M85 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scrt1Q99M85 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scrt1Q99M85 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scrt1Q99M85 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scrt1Q99M85 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scrt1Q99M85 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.82■□□□□ 0.44
Scrt1Q99M85 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Gm26571-201ENSMUST00000181399 666 ntBASIC17.81■□□□□ 0.44
Scrt1Q99M85 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.81■□□□□ 0.44
Scrt1Q99M85 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.81■□□□□ 0.44
Scrt1Q99M85 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scrt1Q99M85 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.81■□□□□ 0.44
Scrt1Q99M85 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scrt1Q99M85 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.8■□□□□ 0.44
Scrt1Q99M85 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.8■□□□□ 0.44
Scrt1Q99M85 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scrt1Q99M85 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.79■□□□□ 0.44
Scrt1Q99M85 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scrt1Q99M85 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms