Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.85■□□□□ 0.61
Cdca3Q99M54 Gm10399-202ENSMUST00000202768 748 ntBASIC18.85■□□□□ 0.61
Cdca3Q99M54 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdca3Q99M54 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdca3Q99M54 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdca3Q99M54 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdca3Q99M54 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdca3Q99M54 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdca3Q99M54 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.81■□□□□ 0.6
Cdca3Q99M54 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cdca3Q99M54 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdca3Q99M54 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.8■□□□□ 0.6
Cdca3Q99M54 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.8■□□□□ 0.6
Cdca3Q99M54 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdca3Q99M54 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.79■□□□□ 0.6
Cdca3Q99M54 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdca3Q99M54 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.78■□□□□ 0.6
Cdca3Q99M54 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Cdca3Q99M54 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdca3Q99M54 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdca3Q99M54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.77■□□□□ 0.6
Cdca3Q99M54 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdca3Q99M54 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.77■□□□□ 0.6
Cdca3Q99M54 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdca3Q99M54 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdca3Q99M54 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms