Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Golgb1-201ENSMUST00000023534 498 ntBASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb2Q91Y00 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb2Q91Y00 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb2Q91Y00 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhb2Q91Y00 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb2Q91Y00 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb2Q91Y00 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb2Q91Y00 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb2Q91Y00 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdhb2Q91Y00 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb2Q91Y00 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.64■■□□□ 1.05
Pcdhb2Q91Y00 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb2Q91Y00 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb2Q91Y00 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb2Q91Y00 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb2Q91Y00 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb2Q91Y00 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb2Q91Y00 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb2Q91Y00 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb2Q91Y00 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms