Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim60Q8VI40 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim60Q8VI40 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.12■□□□□ 0.97
Trim60Q8VI40 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.12■□□□□ 0.97
Trim60Q8VI40 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.12■□□□□ 0.97
Trim60Q8VI40 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim60Q8VI40 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.11■□□□□ 0.97
Trim60Q8VI40 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim60Q8VI40 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Gm45444-201ENSMUST00000211394 898 ntBASIC21.1■□□□□ 0.97
Trim60Q8VI40 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim60Q8VI40 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim60Q8VI40 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim60Q8VI40 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim60Q8VI40 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim60Q8VI40 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.08■□□□□ 0.97
Trim60Q8VI40 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim60Q8VI40 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Trim60Q8VI40 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim60Q8VI40 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.07■□□□□ 0.96
Trim60Q8VI40 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim60Q8VI40 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim60Q8VI40 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim60Q8VI40 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim60Q8VI40 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim60Q8VI40 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.06■□□□□ 0.96
Trim60Q8VI40 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim60Q8VI40 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Cap2-205ENSMUST00000225824 1634 ntBASIC21.05■□□□□ 0.96
Trim60Q8VI40 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Trim60Q8VI40 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim60Q8VI40 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim60Q8VI40 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim60Q8VI40 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.03■□□□□ 0.96
Trim60Q8VI40 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.02■□□□□ 0.96
Trim60Q8VI40 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms