Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CipcQ8R0W1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CipcQ8R0W1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.24■□□□□ 0.67
CipcQ8R0W1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CipcQ8R0W1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CipcQ8R0W1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CipcQ8R0W1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.22■□□□□ 0.67
CipcQ8R0W1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.22■□□□□ 0.67
CipcQ8R0W1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.21■□□□□ 0.67
CipcQ8R0W1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CipcQ8R0W1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.2■□□□□ 0.66
CipcQ8R0W1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CipcQ8R0W1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.19■□□□□ 0.66
CipcQ8R0W1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CipcQ8R0W1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CipcQ8R0W1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CipcQ8R0W1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.17■□□□□ 0.66
CipcQ8R0W1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CipcQ8R0W1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CipcQ8R0W1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CipcQ8R0W1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CipcQ8R0W1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CipcQ8R0W1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.16■□□□□ 0.66
CipcQ8R0W1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CipcQ8R0W1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CipcQ8R0W1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CipcQ8R0W1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms