Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc4Q8CG47 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc4Q8CG47 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc4Q8CG47 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc4Q8CG47 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC25.24■■□□□ 1.63
Smc4Q8CG47 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Smc4Q8CG47 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc4Q8CG47 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc4Q8CG47 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc4Q8CG47 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Smc4Q8CG47 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc4Q8CG47 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Smc4Q8CG47 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
Smc4Q8CG47 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc4Q8CG47 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC25.22■■□□□ 1.63
Smc4Q8CG47 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.22■■□□□ 1.63
Smc4Q8CG47 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Smc4Q8CG47 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Smc4Q8CG47 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.21■■□□□ 1.63
Smc4Q8CG47 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.21■■□□□ 1.63
Smc4Q8CG47 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Smc4Q8CG47 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Smc4Q8CG47 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Smc4Q8CG47 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC25.2■■□□□ 1.63
Smc4Q8CG47 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.2■■□□□ 1.62
Smc4Q8CG47 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.2■■□□□ 1.62
Smc4Q8CG47 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc4Q8CG47 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Smc4Q8CG47 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Smc4Q8CG47 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.18■■□□□ 1.62
Smc4Q8CG47 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Smc4Q8CG47 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc4Q8CG47 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Smc4Q8CG47 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc4Q8CG47 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
Smc4Q8CG47 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc4Q8CG47 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.15■■□□□ 1.62
Smc4Q8CG47 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Smc4Q8CG47 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc4Q8CG47 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Smc4Q8CG47 Mir7075-201ENSMUST00000184187 82 ntBASIC25.15■■□□□ 1.62
Smc4Q8CG47 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc4Q8CG47 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.14■■□□□ 1.62
Smc4Q8CG47 Serp2-204ENSMUST00000228055 705 ntBASIC25.14■■□□□ 1.62
Smc4Q8CG47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Smc4Q8CG47 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Smc4Q8CG47 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Smc4Q8CG47 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc4Q8CG47 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc4Q8CG47 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
Smc4Q8CG47 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc4Q8CG47 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25.13■■□□□ 1.61
Smc4Q8CG47 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Smc4Q8CG47 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Smc4Q8CG47 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Smc4Q8CG47 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Smc4Q8CG47 Gm6139-201ENSMUST00000079261 882 ntBASIC25.12■■□□□ 1.61
Smc4Q8CG47 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms