Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrif1Q8CDD9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lrif1Q8CDD9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Lrif1Q8CDD9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lrif1Q8CDD9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Lrif1Q8CDD9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrif1Q8CDD9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Gm5812-201ENSMUST00000061073 957 ntBASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrif1Q8CDD9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrif1Q8CDD9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrif1Q8CDD9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrif1Q8CDD9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrif1Q8CDD9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrif1Q8CDD9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrif1Q8CDD9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrif1Q8CDD9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Lrif1Q8CDD9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.08■□□□□ 0.81
Lrif1Q8CDD9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.08■□□□□ 0.8
Lrif1Q8CDD9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Lrif1Q8CDD9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrif1Q8CDD9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrif1Q8CDD9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.08■□□□□ 0.8
Lrif1Q8CDD9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Gm43566-201ENSMUST00000196851 808 ntBASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.07■□□□□ 0.8
Lrif1Q8CDD9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms