Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lysmd4Q8CC84 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lysmd4Q8CC84 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lysmd4Q8CC84 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Lysmd4Q8CC84 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Lysmd4Q8CC84 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lysmd4Q8CC84 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lysmd4Q8CC84 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lysmd4Q8CC84 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lysmd4Q8CC84 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lysmd4Q8CC84 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lysmd4Q8CC84 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lysmd4Q8CC84 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.27■□□□□ 0.52
Lysmd4Q8CC84 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lysmd4Q8CC84 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.27■□□□□ 0.52
Lysmd4Q8CC84 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd4Q8CC84 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lysmd4Q8CC84 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Lysmd4Q8CC84 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lysmd4Q8CC84 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms