Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9949Q8C9F4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm9949Q8C9F4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm9949Q8C9F4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm9949Q8C9F4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm9949Q8C9F4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Gm9949Q8C9F4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Gm9959-201ENSMUST00000068277 390 ntBASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm9949Q8C9F4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9949Q8C9F4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm9949Q8C9F4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm9949Q8C9F4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9949Q8C9F4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Etf1-202ENSMUST00000180351 108 ntBASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gm9949Q8C9F4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm9949Q8C9F4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm9949Q8C9F4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms