Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.07■□□□□ 0.32
Smim4Q8C1Q6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Cap2-205ENSMUST00000225824 1634 ntBASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim4Q8C1Q6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smim4Q8C1Q6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim4Q8C1Q6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.03■□□□□ 0.32
Smim4Q8C1Q6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim4Q8C1Q6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smim4Q8C1Q6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smim4Q8C1Q6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smim4Q8C1Q6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim4Q8C1Q6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17■□□□□ 0.31
Smim4Q8C1Q6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
Smim4Q8C1Q6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms