Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zc3hc1Q80YV2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.66■□□□□ 0.58
Zc3hc1Q80YV2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zc3hc1Q80YV2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Zc3hc1Q80YV2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Zc3hc1Q80YV2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3hc1Q80YV2 Gm7332-201ENSMUST00000118351 454 ntBASIC18.64■□□□□ 0.57
Zc3hc1Q80YV2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Zc3hc1Q80YV2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zc3hc1Q80YV2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3hc1Q80YV2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Zc3hc1Q80YV2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3hc1Q80YV2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zc3hc1Q80YV2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Zc3hc1Q80YV2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zc3hc1Q80YV2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.6■□□□□ 0.57
Zc3hc1Q80YV2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3hc1Q80YV2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Zc3hc1Q80YV2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3hc1Q80YV2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3hc1Q80YV2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3hc1Q80YV2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3hc1Q80YV2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Zc3hc1Q80YV2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3hc1Q80YV2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3hc1Q80YV2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms